BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002B12SP1|AL424922
(989 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1600 1923 0.0
>3x_Contig1600
Length = 9359
Score = 1923 bits (969), Expect = 0.0
Identities = 985/989 (99%), Gaps = 2/989 (0%)
Strand = Plus / Minus
Query: 3 ttgcmagaatctctccaatctacctgaagaatgctctggaccttgaccatcgtaaccgtg 62
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8039 ttgcaagaatctctccaatctacctgaagaatgctctggaccttgaccatcgtaaccgtg 7980
Query: 63 aggcaaggacaagactaacccggatctttgcttccatttcacttcaccagcggcaatgaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7979 aggcaaggacaagactaacccggatctttgcttccatttcacttcaccagcggcaatgaa 7920
Query: 123 ttgatcgatgatgacttgagcagtgttggcgaaatcaccgaattgagcttcccaaacaac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7919 ttgatcgatgatgacttgagcagtgttggcgaaatcaccgaattgagcttcccaaacaac 7860
Query: 183 gaaataatctgggttagtcaaagagtaaccatactcgaaacccatacaaccgtattcaga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7859 gaaataatctgggttagtcaaagagtaaccatactcgaaacccatacaaccgtattcaga 7800
Query: 243 caacgaagaattacagatggtgaagttagcttgtttttcagacaagtgctttaatggagt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7799 caacgaagaattacagatggtgaagttagcttgtttttcagacaagtgctttaatggagt 7740
Query: 303 gtaagtattctcggatttttggtcgtgaagaacagcatgtctttgtgaaaaggtacctct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7739 gtaagtattctcggatttttggtcgtgaagaacagcatgtctttgtgaaaaggtacctct 7680
Query: 363 ttcaacatcttcaccagaaactctgacgtgattaccttccaacactaaggaaccgaaagc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7679 ttcaacatcttcaccagaaactctgacgtgattaccttccaacactaaggaaccgaaagc 7620
Query: 423 taatgcttcaccggtagaccagtcaataccttcaccggattcaactgctttacctctgtt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7619 taatgcttcaccggtagaccagtcaataccttcaccggattcaactgctttacctctgtt 7560
Query: 483 ggttaaaattctcttcaagttcttatgaacttcgaagttctctggccatgaggagatggt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7559 ggttaaaattctcttcaagttcttatgaacttcgaagttctctggccatgaggagatggt 7500
Query: 543 cttaccaatgttcttcaaagtatcagcatcaacgacggttggttcgtgggataagatttc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7499 cttaccaatgttcttcaaagtatcagcatcaacgacggttggttcgtgggataagatttc 7440
Query: 603 agtagctaaagcctttggagacttgaaaccttcccaagcagcagttaaccattctcttga 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7439 agtagctaaagcctttggagacttgaaaccttcccaagcagcagttaaccattctcttga 7380
Query: 663 agttggcttatagtcctttgccttctcatatgcttcctcgaatagaccccaaacccattt 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7379 agttggcttatagtcctttgccttctcatatgcttcctcgaatagaccccaaacccattt 7320
Query: 723 cttatgttcatcgatatcttgcttggtgaaggaaccttcagataccaacttttccgtgta 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7319 cttatgttcatcgatatcttgcttggtgaaggaaccttcagataccaacttttccgtgta 7260
Query: 783 aacgtcaatgacagatttttgcttagaaatcttttggtacattaatggttgtgtgaagga 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7259 aacgtcaatgacagatttttgcttagaaatcttttggtacattaatggttgtgtgaagga 7200
Query: 843 aggttggtcagtttcattatgaccatgctttctccatccgacgacgtcaataatggcatc 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7199 aggttggtcagtttcattatgaccatgctttctccatccgacgacgtcaataatggcatc 7140
Query: 903 agtgtggaaagtagctctccattcagcagccaagttgaaaatgaatgt-agagc-tyaac 960
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||
Sbjct: 7139 agtgtggaaagtagctctccattcagcagccaagttgaaaatgaatgtaagagcttcaac 7080
Query: 961 atcgttggcatttacatggaagataggag 989
|||||||||||||||||||||||||||||
Sbjct: 7079 atcgttggcatttacatggaagataggag 7051
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7027
Number of Sequences: 1807
Number of extensions: 7027
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 989
length of database: 10,358,551
effective HSP length: 16
effective length of query: 973
effective length of database: 10,329,639
effective search space: 10050738747
effective search space used: 10050738747
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)